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Image Search Results
Journal: PLoS ONE
Article Title: Rise of CC398 Lineage of Staphylococcus aureus among Infective Endocarditis Isolates Revealed by Two Consecutive Population-Based Studies in France
doi: 10.1371/journal.pone.0051172
Figure Lengend Snippet: . Circular representation of the phylogenetic tree obtained using UPGMA method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Article Snippet: To infer clonal relatedness, the Based Upon Repeat Pattern (BURP) algorithm was used followed by circular representation of the phylogenetic tree obtained using
Techniques: